STRINGSTRING
Mettu_3966 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3966" - Transcriptional regulator with cupin sensor, AraC family in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3966Transcriptional regulator with cupin sensor, AraC family (330 aa)    
Predicted Functional Partners:
Mettu_3697
Aminomethyltransferase ; The glycine cleavage system catalyzes the degradation of glycine (360 aa)
        
      0.713
Mettu_3018
FAD dependent oxidoreductase (353 aa)
        
      0.657
Mettu_2837
Alpha/beta hydrolase fold protein (254 aa)
        
      0.657
Mettu_2475
Glycine oxidase ThiO (366 aa)
        
      0.657
Mettu_0134
Carboxylesterase (287 aa)
        
      0.657
Mettu_2338
ATP-binding region ATPase domain protein (564 aa)
    
 
 
  0.596
Mettu_3967
Putative uncharacterized protein (146 aa)
              0.590
Mettu_0835
Type III secretion exporter (94 aa)
      
        0.563
Mettu_2005
Integral membrane sensor signal transduction histidine kinase (613 aa)
    
 
 
  0.477
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (6%) [HD]
STRING is part of the ELIXIR infrastructure: it is one of ELIXIR's Core Data Resources.  Learn more >