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Mettu_3967 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3967" - Putative uncharacterized protein in Methylobacter tundripaludum
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3967Putative uncharacterized protein (146 aa)    
Predicted Functional Partners:
Mettu_3966
Transcriptional regulator with cupin sensor, AraC family (330 aa)
              0.590
Mettu_2759
Helix-turn-helix, AraC domain protein (254 aa)
 
          0.587
Mettu_3180
Fatty acid desaturase (425 aa)
   
        0.546
Mettu_4143
Phospholipid/glycerol acyltransferase (266 aa)
   
          0.481
Mettu_3968
Cytochrome b561 (184 aa)
              0.473
recC
Helicase/nuclease RecBCD subunit RecC ; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3’ direction. Cuts ssDNA a few nucleotides 3’ to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3’-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and [...] (1077 aa)
   
          0.419
recD
Helicase/nuclease RecBCD subunit RecD ; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3’ direction. Cuts ssDNA a few nucleotides 3’ to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3’-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and [...] (562 aa)
   
          0.415
Mettu_3318
Helix-turn-helix, AraC domain protein (268 aa)
 
          0.408
Mettu_2357
Anthranilate synthase component I domain protein (124 aa)
   
          0.403
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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