STRINGSTRING
Mettu_4001 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_4001" - Nitrilase in Methylobacter tundripaludum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_4001Nitrilase (330 aa)    
Predicted Functional Partners:
Mettu_4003
GCN5-related N-acetyltransferase (180 aa)
 
 
  0.986
Mettu_4002
Radical SAM domain protein (367 aa)
 
     
  0.982
Mettu_4004
AIR synthase related protein (325 aa)
 
     
  0.978
Mettu_4005
Putative uncharacterized protein (95 aa)
 
     
  0.943
Mettu_4000
Putative uncharacterized protein (160 aa)
 
     
  0.938
Mettu_4006
FAD dependent oxidoreductase (431 aa)
 
 
  0.918
Mettu_0758
Glutamate synthase (Ferredoxin) (1539 aa)
       
  0.918
Mettu_3793
Oxidoreductase FAD/NAD(P)-binding domain protein (1230 aa)
   
 
  0.894
Mettu_3264
Glutamine synthetase (469 aa)
       
  0.893
Mettu_0292
L-aspartate oxidase ; Catalyzes the oxidation of L-aspartate to iminoaspartate (531 aa)
       
  0.891
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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