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Mettu_4002 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_4002" - KEGG: vap:Vapar_0560 radical SAM domain protein in Methylobacter tundripaludum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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Experiments
Databases
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[Homology]
Score
Mettu_4002KEGG- vap-Vapar_0560 radical SAM domain protein; PFAM- Radical SAM; SMART- Elongator protein 3/MiaB/NifB (367 aa)    
Predicted Functional Partners:
Mettu_4003
PFAM- GCN5-related N-acetyltransferase; KEGG- sno-Snov_3715 GCN5-related N-acetyltransferase (180 aa)
     
  0.993
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (355 aa)
         
    0.974
Mettu_4001
Nitrilase; KEGG- bvi-Bcep1808_6052 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PFAM- Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (330 aa)
 
          0.974
Mettu_4004
PFAM- AIR synthase related protein; AIR synthase related protein, C-terminal; KEGG- bvi-Bcep1808_6055 AIR synthase-like protein (325 aa)
 
          0.970
Mettu_0723
KEGG- gca-Galf_1632 uroporphyrinogen decarboxylase (URO-D) (342 aa)
         
    0.952
Mettu_4000
KEGG- azc-AZC_0073 hypothetical protein (160 aa)
 
     
  0.930
Mettu_4005
KEGG- vap-Vapar_0557 hypothetical protein (95 aa)
 
          0.929
Mettu_4006
PFAM- FAD dependent oxidoreductase; KEGG- mea-Mex_2p1111 hypothetical protein (431 aa)
 
     
  0.849
birA
Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5’-adenylate (BirA-bio- 5’-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon (332 aa)
         
  0.793
ubiA
4-hydroxybenzoate octaprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate (289 aa)
         
  0.512
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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