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STRINGSTRING
Mettu_4003 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_4003" - PFAM: GCN5-related N-acetyltransferase in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_4003PFAM- GCN5-related N-acetyltransferase; KEGG- sno-Snov_3715 GCN5-related N-acetyltransferase (180 aa)    
Predicted Functional Partners:
Mettu_4002
KEGG- vap-Vapar_0560 radical SAM domain protein; PFAM- Radical SAM; SMART- Elongator protein 3/MiaB/NifB (367 aa)
     
  0.993
Mettu_4004
PFAM- AIR synthase related protein; AIR synthase related protein, C-terminal; KEGG- bvi-Bcep1808_6055 AIR synthase-like protein (325 aa)
          0.990
Mettu_4001
Nitrilase; KEGG- bvi-Bcep1808_6052 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PFAM- Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (330 aa)
 
 
    0.976
Mettu_4005
KEGG- vap-Vapar_0557 hypothetical protein (95 aa)
 
        0.930
Mettu_4000
KEGG- azc-AZC_0073 hypothetical protein (160 aa)
 
   
  0.923
Mettu_4006
PFAM- FAD dependent oxidoreductase; KEGG- mea-Mex_2p1111 hypothetical protein (431 aa)
 
   
  0.851
argA
Amino-acid acetyltransferase; KEGG- mca-MCA2084 N-acetylglutamate synthase; TIGRFAM- Amino-acid N-acetyltransferase (ArgA); PFAM- Aspartate/glutamate/uridylate kinase; GCN5-related N-acetyltransferase; Belongs to the acetyltransferase family. ArgA subfamily (438 aa)
   
 
  0.731
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP (528 aa)
       
  0.633
Mettu_2658
CoA-binding domain protein; PFAM- CoA-binding; GCN5-related N-acetyltransferase; KEGG- gca-Galf_1381 CoA-binding domain-containing protein (893 aa)
   
  0.600
panD
Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine (128 aa)
   
 
  0.571
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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