STRINGSTRING
Mettu_4007 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_4007" - Radical SAM domain protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_4007Radical SAM domain protein (323 aa)    
Predicted Functional Partners:
Mettu_4009
SNARE associated protein (223 aa)
 
          0.948
hemE
Uroporphyrinogen decarboxylase ; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (355 aa)
       
  0.912
Mettu_0723
Uroporphyrinogen decarboxylase (URO-D) (342 aa)
       
  0.912
Mettu_4015
Arsenite methyltransferase (348 aa)
 
          0.901
Mettu_4008
Putative uncharacterized protein (214 aa)
 
          0.887
Mettu_2673
Glycosyl transferase family 2 (229 aa)
 
          0.882
Mettu_2671
Putative uncharacterized protein (215 aa)
 
          0.882
Mettu_4010
DoxX family protein (190 aa)
              0.773
cysG
Siroheme synthase ; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme (464 aa)
   
   
  0.728
Mettu_3247
Putative transcriptional regulator, AsnC family (184 aa)
   
 
  0.678
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (6%) [HD]