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Mettu_4011 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_4011" - KEGG: spl:Spea_1502 hypothetical protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_4011KEGG- spl-Spea_1502 hypothetical protein (98 aa)    
Predicted Functional Partners:
Mettu_4010
DoxX family protein; PFAM- DoxX; KEGG- mmb-Mmol_1090 DoxX family protein (190 aa)
 
          0.745
Mettu_1913
KEGG- spl-Spea_1502 hypothetical protein (132 aa)
   
          0.736
Mettu_1911
PFAM- Protein of unknown function DUF2063; KEGG- nhl-Nhal_2720 hypothetical protein (263 aa)
   
          0.706
Mettu_4014
RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG- tmz-Tmz1t_2737 RNA polymerase sigma factor; TIGRFAM- RNA polymerase sigma-24 related; RNA polymerase sigma-70; PFAM- RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; Belongs to the sigma-70 factor family. ECF subfamily (198 aa)
 
          0.558
Mettu_2711
KEGG- pmx-PERMA_1496 hypothetical protein (141 aa)
   
          0.509
Mettu_4009
PFAM- SNARE associated Golgi protein; KEGG- nde-NIDE1145 hypothetical protein (223 aa)
              0.487
Mettu_4008
KEGG- pin-Ping_1876 hypothetical protein (214 aa)
              0.486
Mettu_4007
PFAM- Radical SAM; KEGG- noc-Noc_0590 radical SAM domain-containing protein (323 aa)
              0.486
Mettu_4012
KEGG- nde-NIDE0067 hypothetical protein (73 aa)
              0.464
Mettu_4013
KEGG- app-CAP2UW1_3002 hypothetical protein (66 aa)
              0.455
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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