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Mettu_4013 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_4013" - KEGG: app:CAP2UW1_3002 hypothetical protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_4013KEGG- app-CAP2UW1_3002 hypothetical protein (66 aa)    
Predicted Functional Partners:
Mettu_4014
RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG- tmz-Tmz1t_2737 RNA polymerase sigma factor; TIGRFAM- RNA polymerase sigma-24 related; RNA polymerase sigma-70; PFAM- RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; Belongs to the sigma-70 factor family. ECF subfamily (198 aa)
              0.845
Mettu_4012
KEGG- nde-NIDE0067 hypothetical protein (73 aa)
              0.826
Mettu_4015
KEGG- sco-SCO3452 methyltransferase; PFAM- Methyltransferase type 11 (348 aa)
              0.821
Mettu_4016
PFAM- Phosphate transporter; KEGG- ote-Oter_0303 phosphate transporter (369 aa)
              0.752
Mettu_4011
KEGG- spl-Spea_1502 hypothetical protein (98 aa)
              0.455
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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