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STRINGSTRING
Mettu_4018 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_4018" - PFAM: Glutaredoxin in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_4018PFAM- Glutaredoxin; KEGG- mca-MCA2787 hypothetical protein (400 aa)    
Predicted Functional Partners:
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family (367 aa)
     
  0.834
Mettu_4019
Uncharacterized protein; PFAM- Archease, tRNA m5C methyltransferase chaperone; KEGG- tgr-Tgr7_1949 protein of unknown function DUF101 (144 aa)
 
        0.800
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (930 aa)
   
 
  0.795
Mettu_2599
TIGRFAM- Thioredoxin reductase; KEGG- tcx-Tcr_0763 thioredoxin reductase; PFAM- FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family (318 aa)
   
  0.763
Mettu_3680
KEGG- ttu-TERTU_1636 ribonucleotide reductase, alpha subunit (254 aa)
   
  0.755
Mettu_3679
Vitamin B12-dependent ribonucleotide reductase; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen (716 aa)
   
  0.755
Mettu_3471
KEGG- rfr-Rfer_1613 selenide, water dikinase; TIGRFAM- Pyridine nucleotide-disulphide oxidoreductase family protein, N-terminal; Selenide water dikinase; PFAM- AIR synthase related protein, C-terminal; AIR synthase related protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Belongs to the selenophosphate synthase 1 family. Class I subfamily (756 aa)
         
  0.595
Mettu_0233
Multi-sensor signal transduction multi-kinase; PFAM- ATP-binding region, ATPase-like; GAF; Serine/threonine-protein kinase-like domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; KEGG- putative phytochrome sensor protein; SMART- ATP-binding region, ATPase-like; GAF; Serine/threonine-protein kinase domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region (1710 aa)
   
 
  0.586
Mettu_1269
PFAM- Protein of unknown function DUF115; KEGG- pca-Pcar_1143 hypothetical protein (838 aa)
   
          0.533
Mettu_0125
KEGG- asa-ASA_0905 hypothetical protein (82 aa)
   
          0.511
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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