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STRINGSTRING
Mettu_4023 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_4023" - PFAM: Protein of unknown function DUF1778 in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_4023PFAM- Protein of unknown function DUF1778; KEGG- gca-Galf_1886 hypothetical protein (93 aa)    
Predicted Functional Partners:
Mettu_4022
KEGG- gca-Galf_1887 GCN5-related N-acetyltransferase; manually curated; PFAM- GCN5-related N-acetyltransferase (165 aa)
 
        0.963
Mettu_2291
KEGG- hse-Hsero_1815 histone acetyltransferase HPA2 protein (160 aa)
 
        0.768
Mettu_2290
PFAM- Protein of unknown function DUF1778; KEGG- hse-Hsero_1816 hypothetical protein (104 aa)
   
          0.719
Mettu_3071
Antitoxin; Antitoxin component of a toxin-antitoxin (TA) module (83 aa)
   
          0.491
Mettu_4251
KEGG- tin-Tint_1551 transcriptional regulator, XRE family; PFAM- Helix-turn-helix type 3; SMART- Helix-turn-helix type 3 (104 aa)
   
        0.458
Mettu_3079
PFAM- Protein of unknown function DUF2442; KEGG- hypothetical protein (84 aa)
   
          0.428
Mettu_4024
KEGG- nwa-Nwat_0105 hypothetical protein (129 aa)
              0.417
Mettu_0807
KEGG- rfe-RF_0889 hypothetical protein (85 aa)
   
          0.403
Mettu_2915
KEGG- cja-CJA_1097 hypothetical protein (78 aa)
 
          0.402
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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