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Mettu_4046 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_4046" - KEGG: tkm:TK90_1807 hypothetical protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_4046KEGG- tkm-TK90_1807 hypothetical protein (163 aa)    
Predicted Functional Partners:
Mettu_4047
PFAM- Nucleotidyltransferase; KEGG- aeh-Mlg_0863 DNA polymerase beta subunit (99 aa)
 
          0.974
Mettu_3213
PFAM- Nucleotidyltransferase; KEGG- hna-Hneap_0233 DNA polymerase beta subunit (106 aa)
 
          0.778
Mettu_4045
PFAM- Protein of unknown function DUF808; KEGG- mpt-Mpe_A1369 hypothetical protein (316 aa)
              0.645
Mettu_4048
PFAM- RNA-metabolising metallo-beta-lactamase; KEGG- pap-PSPA7_1526 hypothetical protein (466 aa)
              0.411
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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