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STRINGSTRING
Mettu_4054 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_4054" - PFAM: Protein of unknown function DUF155 in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_4054PFAM- Protein of unknown function DUF155; KEGG- gpb-HDN1F_14140 hypothetical protein (264 aa)    
Predicted Functional Partners:
rlmJ
Ribosomal RNA large subunit methyltransferase J; Specifically methylates the adenine in position 2030 of 23S rRNA (281 aa)
              0.806
Mettu_4053
annotation not available (138 aa)
              0.608
glnS
Glutamine--tRNA ligase; PFAM- Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain; TIGRFAM- Glutaminyl-tRNA synthetase, class Ic; HAMAP- Glutaminyl-tRNA synthetase; KEGG- gpb-HDN1F_33480 glutaminyl-tRNA synthetase (554 aa)
   
        0.528
Mettu_3088
PFAM- GCN5-related N-acetyltransferase; KEGG- ttu-TERTU_0462 acetyltransferase, GNAT family (366 aa)
 
 
      0.513
Mettu_0339
KEGG- mca-MCA1689 hypothetical protein (428 aa)
   
          0.439
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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