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Mettu_4057 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_4057" - KEGG: mca:MCA1820 hypothetical protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_4057KEGG- mca-MCA1820 hypothetical protein; TIGRFAM- Conserved hypothetical protein CHP02096; PFAM- Protein of unknown function DUF1486 (135 aa)    
Predicted Functional Partners:
Mettu_3144
KEGG- mca-MCA1821 hypothetical protein (199 aa)
 
          0.848
Mettu_3143
PFAM- Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG- mmw-Mmwyl1_3133 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (286 aa)
 
          0.789
Mettu_0493
TIGRFAM- Succinate dehydrogenase, flavoprotein subunit; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; KEGG- mca-MCA1550 succinate dehydrogenase flavoprotein subunit; PFAM- Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily (594 aa)
       
  0.641
Mettu_1149
KEGG- cyc-PCC7424_0708 phenazine biosynthesis protein PhzF family; TIGRFAM- Phenazine biosynthesis PhzC/PhzF protein; PFAM- Phenazine biosynthesis PhzC/PhzF protein (305 aa)
       
    0.638
Mettu_3056
Gamma-glutamyltransferase; TIGRFAM- Gamma-glutamyltranspeptidase; KEGG- mca-MCA2148 gamma-glutamyltranspeptidase; PFAM- Gamma-glutamyltranspeptidase (557 aa)
     
 
    0.623
glnS
Glutamine--tRNA ligase; PFAM- Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain; TIGRFAM- Glutaminyl-tRNA synthetase, class Ic; HAMAP- Glutaminyl-tRNA synthetase; KEGG- gpb-HDN1F_33480 glutaminyl-tRNA synthetase (554 aa)
              0.526
Mettu_4196
KEGG- npu-Npun_R2129 hypothetical protein (148 aa)
       
    0.524
Mettu_1586
PFAM- Short-chain dehydrogenase/reductase SDR; KEGG- wch-wcw_0147 hypothetical protein (238 aa)
       
    0.427
Mettu_0174
Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (468 aa)
         
  0.426
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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