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STRINGSTRING
Mettu_4061 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_4061" - PFAM: Cytochrome P450 in Methylobacter tundripaludum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
Mettu_4061PFAM- Cytochrome P450; KEGG- xau-Xaut_0387 cytochrome P450 (442 aa)    
Predicted Functional Partners:
Mettu_3702
Long-chain-fatty-acid--(Acyl-carrier-protein) ligase., 6-deoxyerythronolide-B synthase; KEGG- amino acid adenylation domain-containing protein; PFAM- Beta-ketoacyl synthase, N-terminal; AMP-dependent synthetase/ligase; Polyketide synthase, KR; Phosphopantetheine-binding; Beta-ketoacyl synthase, C-terminal; Acyl transferase (3566 aa)
   
  0.827
Mettu_3714
TIGRFAM- Amino acid adenylation; KEGG- non-ribosomal peptide synthetase; PFAM- AMP-dependent synthetase/ligase; Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; Acyl transferase; Phosphopantetheine-binding; Aminotransferase class-III; Luciferase-like, subgroup; Condensation domain (3129 aa)
   
  0.793
Mettu_3700
TIGRFAM- Amino acid adenylation; KEGG- npu-Npun_R3425 beta-ketoacyl synthase; PFAM- AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding; Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; Acyl transferase; Polyketide synthase, KR; Thioesterase; overlaps another CDS with the same product name (2911 aa)
   
  0.793
Mettu_3131
TIGRFAM- Amino acid adenylation; KEGG- ava-Ava_C0009 amino acid adenylation; PFAM- AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding (1768 aa)
   
  0.790
Mettu_2658
CoA-binding domain protein; PFAM- CoA-binding; GCN5-related N-acetyltransferase; KEGG- gca-Galf_1381 CoA-binding domain-containing protein (893 aa)
       
  0.788
Mettu_0711
PFAM- Squalene/phytoene synthase; KEGG- mca-MCA0813 squalene synthase (399 aa)
 
  0.746
Mettu_1461
PFAM- Monooxygenase, FAD-binding; KEGG- sde-Sde_3485 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases-like (531 aa)
   
  0.733
Mettu_2090
KEGG- mca-MCA1084 hypothetical protein (403 aa)
   
          0.728
Mettu_0576
TIGRFAM- Hopene cyclase; Squalene cyclase; KEGG- mca-MCA0812 squalene-hopene cyclase; PFAM- Prenyltransferase/squalene oxidase (654 aa)
 
  0.718
Mettu_0710
TIGRFAM- Hopene cyclase; Squalene cyclase; KEGG- mca-MCA0812 squalene-hopene cyclase; PFAM- Prenyltransferase/squalene oxidase (651 aa)
 
  0.715
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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