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STRINGSTRING
Mettu_4114 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_4114" - KEGG: noc:Noc_0445 helix-turn-helix protein, CopG in Methylobacter tundripaludum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_4114KEGG- noc-Noc_0445 helix-turn-helix protein, CopG (93 aa)    
Predicted Functional Partners:
Mettu_4113
KEGG- nhl-Nhal_2862 addiction module toxin, RelE/StbE family; TIGRFAM- Addiction module toxin, RelE/StbE; PFAM- Plasmid stabilisation system (97 aa)
 
 
 
  0.930
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family (963 aa)
      
 
  0.805
Mettu_3056
Gamma-glutamyltransferase; TIGRFAM- Gamma-glutamyltranspeptidase; KEGG- mca-MCA2148 gamma-glutamyltranspeptidase; PFAM- Gamma-glutamyltranspeptidase (557 aa)
        
  0.689
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline (275 aa)
          
  0.658
proA
Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate; Belongs to the gamma-glutamyl phosphate reductase family (418 aa)
       
  0.645
Mettu_3264
KEGG- mca-MCA1677 glutamine synthetase, type I; TIGRFAM- Glutamine synthetase type I; PFAM- Glutamine synthetase, catalytic region; Glutamine synthetase, beta-Grasp (469 aa)
          
  0.642
proB
Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate (373 aa)
          
  0.642
Mettu_3697
TIGRFAM- Glycine cleavage system T protein; KEGG- pau-PA14_33040 glycine cleavage system protein T2; PFAM- Glycine cleavage T-protein, N-terminal; Glycine cleavage T-protein, C-terminal barrel (360 aa)
          
  0.631
gcvH
Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein (127 aa)
          
  0.631
Mettu_2377
PFAM- SNARE associated Golgi protein; KEGG- lby-Lbys_3153 SNARE associated golgi proteiN-like protein (218 aa)
      
 
    0.603
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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