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STRINGSTRING
Mettu_4115 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_4115" - PFAM: Protein of unknown function DUF2132 in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_4115PFAM- Protein of unknown function DUF2132; KEGG- ppr-PBPRB0126 hypothetical protein (73 aa)    
Predicted Functional Partners:
Mettu_4116
KEGG- alv-Alvin_1011 RIO-like kinase; PFAM- RIO-like kinase; SMART- RIO kinase (280 aa)
 
          0.891
Mettu_4117
Putative flavoprotein, PP_4765 family; KEGG- har-HEAR0070 putative oxidoreductase; TIGRFAM- uncharacterized flavoprotein, PP_4765 family; HI0933-like protein; PFAM- HI0933-like protein (425 aa)
              0.566
Mettu_0482
PFAM- Protein of unknown function DUF1456; KEGG- shl-Shal_3266 hypothetical protein (156 aa)
 
          0.457
Mettu_4114
KEGG- noc-Noc_0445 helix-turn-helix protein, CopG (93 aa)
              0.443
Mettu_4113
KEGG- nhl-Nhal_2862 addiction module toxin, RelE/StbE family; TIGRFAM- Addiction module toxin, RelE/StbE; PFAM- Plasmid stabilisation system (97 aa)
              0.443
Mettu_0155
PFAM- Protein of unknown function DUF45; KEGG- gem-GM21_3432 protein of unknown function DUF45 (167 aa)
 
          0.423
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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