STRINGSTRING
Mettu_4148 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_4148" - PFAM: Integrase, catalytic core in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_4148PFAM- Integrase, catalytic core; KEGG- net-Neut_2192 integrase catalytic subunit; overlaps another CDS with the same product name (287 aa)    
Predicted Functional Partners:
EGW20996.1
PFAM- Transposase IS3/IS911; KEGG- rms-RMA_0745 transposase (100 aa)
 
   
  0.962
Mettu_0512
PFAM- Transposase IS3/IS911; KEGG- rms-RMA_0745 transposase (124 aa)
 
   
  0.764
EGW22632.1
PFAM- Transposase IS3/IS911; KEGG- rms-RMA_0745 transposase (124 aa)
 
   
  0.764
EGW22270.1
PFAM- Transposase IS3/IS911; KEGG- rms-RMA_0745 transposase (124 aa)
 
   
  0.764
EGW21736.1
PFAM- Transposase IS3/IS911; KEGG- rms-RMA_0745 transposase (124 aa)
 
   
  0.764
Mettu_1068
PFAM- Transposase IS3/IS911; KEGG- yen-YE3040 transposase for insertion element IS3 (121 aa)
 
   
  0.745
Mettu_0001
PFAM- Transposase IS3/IS911; KEGG- rms-RMA_0745 transposase (107 aa)
 
   
  0.642
Mettu_4150
annotation not available (59 aa)
              0.584
Mettu_4147
KEGG- fjo-Fjoh_4839 hypothetical protein (253 aa)
              0.467
Mettu_4151
Phosphoesterase; KEGG- mca-MCA2985 PAP2 superfamily protein; PFAM- Phosphatidic acid phosphatase type 2/haloperoxidase; SMART- Phosphatidic acid phosphatase type 2/haloperoxidase (174 aa)
       
    0.431
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (7%) [HD]