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Mettu_4178 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_4178" - Hly-III family protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
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[Homology]
Score
Mettu_4178Hly-III family protein; PFAM- Hly-III related; KEGG- nhl-Nhal_2817 Hly-III family protein (224 aa)    
Predicted Functional Partners:
Mettu_4176
KEGG- sat-SYN_00564 L-threonine 3-dehydrogenase; PFAM- NAD-dependent epimerase/dehydratase (310 aa)
     
      0.594
Mettu_4177
8-amino-7-oxononanoate synthase; KEGG- sat-SYN_00565 2-amino-3-ketobutyrate coenzyme A ligase; PFAM- Aminotransferase, class I/II (407 aa)
              0.536
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (930 aa)
         
  0.488
Mettu_1576
Outer membrane adhesin like proteiin; TIGRFAM- VCBS repeat domain; PFAM- Putative Ig; KEGG- cch-Cag_1242 VCBS; SMART- Dystroglycan-type cadherin-like (6210 aa)
   
   
  0.480
Mettu_2634
TIGRFAM- Acetyl-CoA carboxylase, biotin carboxylase; KEGG- tgr-Tgr7_0368 acetyl-CoA carboxylase, biotin carboxylase; PFAM- Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal (447 aa)
   
        0.463
Mettu_3486
PFAM- Protein of unknown function DUF21; Cystathionine beta-synthase, core; Transporter-associated region; KEGG- hse-Hsero_1085 hemolysin protein (443 aa)
         
  0.463
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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