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Mettu_4186 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_4186" - KEGG: sbn:Sbal195_1984 hypothetical protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_4186KEGG- sbn-Sbal195_1984 hypothetical protein (78 aa)    
Predicted Functional Partners:
Mettu_0539
PFAM- Haloacid dehalogenase-like hydrolase; KEGG- bgf-BC1003_3688 haloacid dehalogenase domain-containing protein hydrolase (230 aa)
   
          0.481
Mettu_0590
CsbD family protein; PFAM- CsbD-like; KEGG- alv-Alvin_1144 CsbD family protein; Belongs to the UPF0337 (CsbD) family (61 aa)
   
          0.473
Mettu_4187
annotation not available (234 aa)
              0.462
Mettu_0584
CsbD family protein; PFAM- CsbD-like; KEGG- dar-Daro_2060 CsbD-like; Belongs to the UPF0337 (CsbD) family (60 aa)
   
          0.433
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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