Genes that are sometimes fused into single open reading frames.
Known metabolic pathways, protein complexes, signal transduction pathways, etc ... from curated databases.
Proteins whose genes are observed to be correlated in expression, across a large number of experiments.
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
Uncharacterized protein; Manually curated; KEGG- ana-all1618 hypothetical protein (186 aa)
Predicted Functional Partners:
PFAM- Protein of unknown function DUF820; KEGG- tmz-Tmz1t_3766 protein of unknown function DUF820 (196 aa)
PFAM- Protein of unknown function DUF820; KEGG- dfe-Dfer_4673 protein of unknown function DUF820 (203 aa)
PFAM- Protein of unknown function DUF433; KEGG- ava-Ava_1741 hypothetical protein (77 aa)
PFAM- Protein of unknown function DUF820; KEGG- dfe-Dfer_4673 protein of unknown function DUF820 (201 aa)
PFAM- Protein of unknown function DUF820; KEGG- ter-Tery_4530 hypothetical protein (188 aa)
KEGG- slt-Slit_2475 hypothetical protein (110 aa)
KEGG- app-CAP2UW1_3238 PilT protein domain protein; TIGRFAM- Protein of unknown function DUF132; SMART- Nucleotide binding protein, PINc (139 aa)
PFAM- Plasmid pRiA4b ORF-3-like; KEGG- cyn-Cyan7425_4772 hypothetical protein (419 aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin); Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate; Belongs to the IspG family (405 aa)
Transposase; Manually curated; KEGG- amr-AM1_2664 hypothetical protein (356 aa)
Your Current Organism:
NCBI taxonomy Id: 697282 Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96