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lptD protein (Methylobacter tundripaludum) - STRING interaction network
"lptD" - LPS-assembly protein LptD in Methylobacter tundripaludum
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
lptDLPS-assembly protein LptD ; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane (985 aa)    
Predicted Functional Partners:
surA
Rotamase SurA ; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation (434 aa)
 
   
  0.988
lptA
Lipopolysaccharide export system protein LptA ; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm (184 aa)
   
 
  0.959
bamA
Outer membrane protein assembly factor BamA ; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (793 aa)
   
   
  0.867
Mettu_4264
Nucleotidyl transferase (223 aa)
 
          0.861
Mettu_2535
Permease YjgP/YjgQ family protein (383 aa)
 
   
  0.856
Mettu_4263
Aminoglycoside phosphotransferase (332 aa)
 
          0.853
Mettu_2536
Permease YjgP/YjgQ family protein (357 aa)
 
   
  0.848
purD
Phosphoribosylglycinamide synthetase (426 aa)
         
  0.774
lpxH
UDP-2,3-diacylglucosamine diphosphatase ; Catalyzes the hydrolysis of the pyrophosphate bond of UDP-2,3-diacylglucosamine to yield 2,3-diacylglucosamine 1- phosphate (lipid X) and UMP (241 aa)
   
        0.725
lolA
Outer-membrane lipoprotein carrier protein ; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) (196 aa)
   
     
  0.719
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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