• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Mettu_4263 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_4263" - PFAM: Aminoglycoside phosphotransferase in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_4263PFAM- Aminoglycoside phosphotransferase; KEGG- mca-MCA0600 hypothetical protein (332 aa)    
Predicted Functional Partners:
Mettu_4264
PFAM- Nucleotidyl transferase; KEGG- alv-Alvin_2540 nucleotidyl transferase (223 aa)
 
  0.998
Mettu_2645
TIGRFAM- 2-phosphoglycolate phosphatase, prokaryotic; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; KEGG- mep-MPQ_1677 phosphoglycolate phosphatase; PFAM- Haloacid dehalogenase-like hydrolase (225 aa)
   
 
  0.867
Mettu_4265
PFAM- Dodecin flavoprotein; KEGG- cts-Ctha_1555 hypothetical protein (69 aa)
              0.845
nagZ
Beta-hexosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides; Belongs to the glycosyl hydrolase 3 family. NagZ subfamily (336 aa)
       
  0.821
glmU
Bifunctional protein GlmU; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain (488 aa)
     
 
  0.790
lptD
LPS-assembly protein LptD; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane (985 aa)
 
          0.768
surA
Chaperone SurA; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation (434 aa)
 
          0.754
Mettu_4347
KEGG- mca-MCA1300 hypothetical protein; TIGRFAM- Uncharacterised protein family UPF0079, ATPase bacteria; PFAM- Uncharacterised protein family UPF0079, ATPase bacteria (138 aa)
            0.730
Mettu_4267
Acetyltransferase; KEGG- pin-Ping_0801 acetyltransferase (318 aa)
              0.720
Mettu_4266
Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate (207 aa)
              0.720
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (13%) [HD]