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STRINGSTRING
Mettu_4265 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_4265" - PFAM: Dodecin flavoprotein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_4265PFAM- Dodecin flavoprotein; KEGG- cts-Ctha_1555 hypothetical protein (69 aa)    
Predicted Functional Partners:
Mettu_4264
PFAM- Nucleotidyl transferase; KEGG- alv-Alvin_2540 nucleotidyl transferase (223 aa)
              0.846
Mettu_4263
PFAM- Aminoglycoside phosphotransferase; KEGG- mca-MCA0600 hypothetical protein (332 aa)
              0.845
Mettu_4267
Acetyltransferase; KEGG- pin-Ping_0801 acetyltransferase (318 aa)
              0.720
Mettu_4266
Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate (207 aa)
              0.720
lptD
LPS-assembly protein LptD; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane (985 aa)
              0.594
surA
Chaperone SurA; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation (434 aa)
              0.594
Mettu_4268
KEGG- caa-Caka_2960 hypothetical protein (1150 aa)
              0.419
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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