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Mettu_4270 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_4270" - Lysozyme in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_4270Lysozyme; KEGG- bgr-Bgr_03180 phage related lysozyme; PFAM- Glycoside hydrolase, family 24; SH3, type 3 (239 aa)    
Predicted Functional Partners:
guaB
Inosine-5’-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5’-phosphate (IMP) to xanthosine 5’-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth; Belongs to the IMPDH/GMPR family (488 aa)
       
  0.858
Mettu_1231
PFAM- NLP/P60; KEGG- mca-MCA2789 NLP/P60 family protein (160 aa)
       
  0.847
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP (528 aa)
       
    0.826
Mettu_4338
Beta-glucosidase; KEGG- cps-CPS_2365 xylosidase/arabinosidase; PFAM- Glycoside hydrolase, family 3, N-terminal; Glycoside hydrolase, family 3, C-terminal; Belongs to the glycosyl hydrolase 3 family (733 aa)
         
  0.785
Mettu_4271
annotation not available (133 aa)
              0.783
Mettu_4272
annotation not available (230 aa)
              0.770
Mettu_1576
Outer membrane adhesin like proteiin; TIGRFAM- VCBS repeat domain; PFAM- Putative Ig; KEGG- cch-Cag_1242 VCBS; SMART- Dystroglycan-type cadherin-like (6210 aa)
         
  0.754
Mettu_4348
Cell wall hydrolase/autolysin; KEGG- noc-Noc_0337 N-acetylmuramoyl-L-alanine amidase; PFAM- Cell wall hydrolase/autolysin, catalytic; SMART- Cell wall hydrolase/autolysin, catalytic (429 aa)
       
  0.715
Mettu_4269
KEGG- aex-Astex_1574 hypothetical protein (389 aa)
              0.697
Mettu_4273
annotation not available (49 aa)
              0.695
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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