STRINGSTRING
Mettu_4270 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_4270" - Lysozyme in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_4270Lysozyme (239 aa)    
Predicted Functional Partners:
Mettu_4271
Putative uncharacterized protein (133 aa)
              0.792
Mettu_4272
Putative uncharacterized protein (230 aa)
              0.774
Mettu_4269
Putative uncharacterized protein (389 aa)
 
          0.764
Mettu_4273
Putative uncharacterized protein (49 aa)
              0.697
ubiC
Probable chorismate pyruvate-lyase ; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4- hydroxybenzoate (4HB) for the ubiquinone pathway (187 aa)
   
          0.445
Mettu_2187
DNA polymerase I (930 aa)
           
  0.422
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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