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Mettu_4277 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_4277" - Anti-FecI sigma factor, FecR in Methylobacter tundripaludum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_4277Anti-FecI sigma factor, FecR; PFAM- FecR protein; KEGG- nde-NIDE3525 putative iron dicitrate transmembrane sensor FecR (325 aa)    
Predicted Functional Partners:
Mettu_4280
KEGG- pen-PSEEN4768 ECF subfamily RNA polymerase sigma factor; TIGRFAM- RNA polymerase sigma-70; PFAM- RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2 (170 aa)
 
  0.927
Mettu_2320
KEGG- xau-Xaut_2777 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM- RNA polymerase sigma-70; PFAM- RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2 (172 aa)
 
  0.923
Mettu_1537
KEGG- neu-NE0547 ECF subfamily RNA polymerase sigma factor; TIGRFAM- RNA polymerase sigma-70; PFAM- RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2 (167 aa)
 
  0.920
Mettu_3921
PFAM- 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; Crotonase, core; KEGG- rce-RC1_1947 3-hydroxyacyl-CoA dehydrogenase, putative (779 aa)
   
   
    0.806
Mettu_4159
PFAM- TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG- mpt-Mpe_A3267 putative outer membrane receptor for iron transport (733 aa)
 
 
  0.774
Mettu_0880
KEGG- hse-Hsero_0291 TonB-dependent receptor protein; manually curated; PFAM- TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug (781 aa)
 
 
  0.736
Mettu_4014
RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG- tmz-Tmz1t_2737 RNA polymerase sigma factor; TIGRFAM- RNA polymerase sigma-24 related; RNA polymerase sigma-70; PFAM- RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; Belongs to the sigma-70 factor family. ECF subfamily (198 aa)
   
 
  0.675
Mettu_4276
KEGG- nhl-Nhal_3354 efflux transporter, RND family, MFP subunit; TIGRFAM- Secretion protein HlyD; PFAM- Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (381 aa)
              0.616
Mettu_4275
Phosphonate-transporting ATPase; PFAM- ABC transporter-like; KEGG- pin-Ping_3710 ABC transporter foramino acid ATP-binding protein; SMART- ATPase, AAA+ type, core (219 aa)
              0.616
Mettu_0020
PFAM- TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG- mca-MCA2321 TonB-dependent receptor, putative (683 aa)
 
   
  0.557
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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