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Mettu_4277 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_4277" - Anti-FecI sigma factor, FecR in Methylobacter tundripaludum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_4277Anti-FecI sigma factor, FecR (325 aa)    
Predicted Functional Partners:
Mettu_1537
RNA polymerase sigma factor (167 aa)
 
  0.961
Mettu_4280
RNA polymerase, sigma-24 subunit, ECF subfamily (170 aa)
 
 
  0.959
Mettu_2320
RNA polymerase, sigma-24 subunit, ECF subfamily (172 aa)
 
 
  0.958
Mettu_4014
RNA polymerase, sigma-24 subunit, ECF subfamily (198 aa)
   
 
  0.821
Mettu_3125
TonB-dependent siderophore receptor (840 aa)
 
        0.644
Mettu_4276
Efflux transporter, RND family, MFP subunit (381 aa)
   
        0.634
Mettu_4275
Phosphonate-transporting ATPase (219 aa)
   
        0.632
Mettu_2251
TonB-dependent receptor plug (915 aa)
   
        0.608
Mettu_3124
Propeptide PepSY amd peptidase M4 (397 aa)
   
        0.587
Mettu_0020
TonB-dependent receptor (683 aa)
 
        0.547
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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