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Mettu_4278 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_4278" - PFAM: Peptidase S45, penicillin amidase in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_4278PFAM- Peptidase S45, penicillin amidase; KEGG- nde-NIDE2155 putative penicillin amidase (797 aa)    
Predicted Functional Partners:
Mettu_4279
Cyclic peptide transporter; SMART- ATPase, AAA+ type, core; TIGRFAM- Cyclic peptide transporter; KEGG- nde-NIDE2153 cyclic peptide transporter; PFAM- ABC transporter-like; ABC transporter, transmembrane region (549 aa)
 
          0.555
Mettu_4277
Anti-FecI sigma factor, FecR; PFAM- FecR protein; KEGG- nde-NIDE3525 putative iron dicitrate transmembrane sensor FecR (325 aa)
 
          0.514
Mettu_3131
TIGRFAM- Amino acid adenylation; KEGG- ava-Ava_C0009 amino acid adenylation; PFAM- AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding (1768 aa)
 
   
  0.449
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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