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Mettu_4285 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_4285" - Phytoene desaturase in Methylobacter tundripaludum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_4285Phytoene desaturase (498 aa)    
Predicted Functional Partners:
Mettu_4287
Phytoene desaturase (511 aa)
 
       
0.887
Mettu_4286
Aldehyde Dehydrogenase (530 aa)
   
   
  0.864
Mettu_0711
Squalene/phytoene synthase (399 aa)
 
 
  0.844
Mettu_2781
Magnesium chelatase (629 aa)
 
   
  0.840
Mettu_4289
SOUL heme-binding protein (205 aa)
 
        0.805
Mettu_4288
Cobalamin (Vitamin B12) biosynthesis CbiX protein (122 aa)
   
        0.761
Mettu_3299
Glycosyl transferase family 2 (559 aa)
       
  0.746
Mettu_2756
O-methyltransferase family 2 (372 aa)
 
 
  0.729
Mettu_3595
Deoxyribodipyrimidine photo-lyase (453 aa)
 
        0.668
Mettu_4173
Unspecific monooxygenase (451 aa)
 
 
  0.606
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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