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Mettu_4290 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_4290" - KEGG: cpi:Cpin_0897 hypothetical protein in Methylobacter tundripaludum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_4290KEGG- cpi-Cpin_0897 hypothetical protein (159 aa)    
Predicted Functional Partners:
Mettu_4315
KEGG- cvi-CV_0742 hypothetical protein (336 aa)
   
          0.702
Mettu_4289
PFAM- SOUL haem-binding protein; KEGG- pph-Ppha_2804 SOUL heme-binding protein (205 aa)
              0.582
Mettu_4288
PFAM- Cobalamin (vitamin B12) biosynthesis CbiX; KEGG- ant-Arnit_0389 cobalamin (vitamin B12) biosynthesis protein CbiX (122 aa)
              0.573
Mettu_4287
KEGG- bmd-BMD_0657 phytoene desaturase; TIGRFAM- Zeta-phytoene desaturase; PFAM- Amine oxidase (511 aa)
              0.558
Mettu_4285
KEGG- slg-SLGD_00185 phytoene desaturase, neurosporene or lycopene producing/4,4’-diapolycopene oxidase; TIGRFAM- Zeta-phytoene desaturase; PFAM- Amine oxidase; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (498 aa)
              0.558
Mettu_3895
PFAM- Glycosyl transferase, family 2; KEGG- ade-Adeh_2775 glycosyl transferase family protein (292 aa)
   
          0.531
Mettu_4286
PFAM- Aldehyde dehydrogenase; KEGG- bbe-BBR47_48070 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family (530 aa)
              0.519
Mettu_1289
PFAM- Methyltransferase type 11; KEGG- azc-AZC_3475 hypothetical protein (390 aa)
   
          0.457
Mettu_0461
Oxidoreductase domain protein; PFAM- Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG- mca-MCA0398 Gfo/Idh/MocA family oxidoreductase (311 aa)
 
          0.407
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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