STRINGSTRING
Mettu_4370 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_4370" - Putative transposase in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_4370Putative transposase (84 aa)    
Predicted Functional Partners:
Mettu_4369
No annotation available (73 aa)
              0.859
Mettu_4373
Integrase family protein (237 aa)
   
          0.773
Mettu_3104
Integrase domain protein SAM domain protein (160 aa)
   
          0.772
Mettu_0272
Integrase family protein (291 aa)
   
          0.760
Mettu_2311
Integrase family protein (291 aa)
   
          0.760
Mettu_1964
No annotation available (291 aa)
   
          0.760
Mettu_0272
No annotation available (291 aa)
   
          0.760
Mettu_2669
Integrase family protein (291 aa)
   
          0.759
Mettu_2414
Transposase (363 aa)
   
          0.679
Mettu_4371
Transposase IS4 family protein (177 aa)
              0.542
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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