• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Mettu_4380 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_4380" - Redoxin domain protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_4380Redoxin domain protein; PFAM- Redoxin; KEGG- hoh-Hoch_6651 redoxin domain protein (175 aa)    
Predicted Functional Partners:
Mettu_4379
TIGRFAM- Glutathione reductase, plant; KEGG- nhl-Nhal_3170 glutathione-disulfide reductase; PFAM- FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family (449 aa)
 
   
  0.902
Mettu_3612
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide (704 aa)
   
 
  0.893
trpC
KEGG- psp-PSPPH_0674 indole-3-glycerol-phosphate synthase; PFAM- Indole-3-glycerol phosphate synthase; Belongs to the TrpC family (266 aa)
      
 
    0.773
Mettu_2384
Peroxiredoxin; KEGG- abo-ABO_0723 oxidoreductase; PFAM- Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin, C-terminal (200 aa)
      
 
  0.736
Mettu_0278
Peroxidase; KEGG- pol-Bpro_4841 peroxidase; PFAM- Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin, C-terminal (219 aa)
      
 
  0.736
Mettu_0277
PFAM- ThiJ/PfpI; KEGG- bph-Bphy_6748 ThiJ/PfpI domain-containing protein (231 aa)
      
 
  0.670
Mettu_1921
Thioredoxin; KEGG- mca-MCA0057 thioredoxin; TIGRFAM- Thioredoxin; PFAM- Thioredoxin domain; Belongs to the thioredoxin family (108 aa)
     
 
  0.657
Mettu_4342
KEGG- nmr-Nmar_1252 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen (219 aa)
      
  0.652
Mettu_4334
Redoxin domain protein; PFAM- Redoxin; KEGG- tbd-Tbd_2431 putative thioredoxin (162 aa)
      
  0.652
Mettu_4134
Hydrogenase expression/formation protein; PFAM- Hydrogenase-1 expression HyaE; KEGG- tin-Tint_3080 hydrogenase-1 expression HyaE; Belongs to the HupG/HyaE family (139 aa)
      
  0.652
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (8%) [HD]
STRING is part of the ELIXIR infrastructure: it is one of ELIXIR's Core Data Resources.  Learn more >