STRINGSTRING
Mettu_4393 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_4393" - Replication protein A in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_4393Replication protein A (479 aa)    
Predicted Functional Partners:
Mettu_4392
Putative uncharacterized protein (158 aa)
              0.859
Mettu_0976
Tail X family protein (68 aa)
   
          0.742
Mettu_0965
Baseplate J family protein (318 aa)
   
          0.738
Mettu_0977
Late control D family protein (324 aa)
   
        0.728
Mettu_0975
P2 GpU family protein (130 aa)
   
        0.724
Mettu_0966
Phage tail protein I (187 aa)
   
          0.724
Mettu_0963
Phage baseplate assembly protein V (187 aa)
   
          0.721
Mettu_0964
GPW/gp25 family protein (112 aa)
   
          0.697
Mettu_0970
Phage major tail tube protein (167 aa)
   
          0.691
Mettu_4394
Putative uncharacterized protein (113 aa)
              0.664
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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