Acbd5 protein (Blattella germanica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

Acbd5

Acyl-CoA-binding domain-containing protein 5. (76 aa)

Predicted Functional Partners:

C0J52_07904

0.731

pex16

0.719

Fis1

0.712

PEX14

0.711

C0J52_15331

0.711

SCP2

0.697

ABCD3_2

0.688

Pex12

0.684

atad1b

0.681

Gdap1

0.664

Your Current Organism:

Blattella germanica

NCBI taxonomy Id: 6973
Other names: B. germanica, German cockroach

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABCD3_2	Acbd5	A0A2P8YXM0	A0A2P8XAK1	ATP-binding cassette sub-family D member 3.	Acyl-CoA-binding domain-containing protein 5.	0.688
ABCD3_2	C0J52_07904	A0A2P8YXM0	A0A2P8Y3J6	ATP-binding cassette sub-family D member 3.	SH3 domain-containing protein.	0.899
ABCD3_2	C0J52_15331	A0A2P8YXM0	A0A2P8YRX7	ATP-binding cassette sub-family D member 3.	Pex14_N domain-containing protein.	0.791
ABCD3_2	Fis1	A0A2P8YXM0	A0A2P8YEY7	ATP-binding cassette sub-family D member 3.	Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering.	0.803
ABCD3_2	Gdap1	A0A2P8YXM0	A0A2P8YEA1	ATP-binding cassette sub-family D member 3.	Ganglioside-induced differentiation-associated protein 1; Belongs to the GST superfamily.	0.728
ABCD3_2	PEX14	A0A2P8YXM0	A0A2P8XUN7	ATP-binding cassette sub-family D member 3.	Peroxisomal membrane protein PEX14.	0.791
ABCD3_2	Pex12	A0A2P8YXM0	A0A2P8Y1F9	ATP-binding cassette sub-family D member 3.	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	0.859
ABCD3_2	SCP2	A0A2P8YXM0	A0A2P8Z699	ATP-binding cassette sub-family D member 3.	Non-specific lipid-transfer protein.	0.740
ABCD3_2	atad1b	A0A2P8YXM0	A0A2P8YIF9	ATP-binding cassette sub-family D member 3.	ATPase family AAA domain-containing protein 1-B; Belongs to the AAA ATPase family.	0.807
ABCD3_2	pex16	A0A2P8YXM0	A0A2P8ZPQ0	ATP-binding cassette sub-family D member 3.	Peroxisomal membrane protein PEX16.	0.797
Acbd5	ABCD3_2	A0A2P8XAK1	A0A2P8YXM0	Acyl-CoA-binding domain-containing protein 5.	ATP-binding cassette sub-family D member 3.	0.688
Acbd5	C0J52_07904	A0A2P8XAK1	A0A2P8Y3J6	Acyl-CoA-binding domain-containing protein 5.	SH3 domain-containing protein.	0.731
Acbd5	C0J52_15331	A0A2P8XAK1	A0A2P8YRX7	Acyl-CoA-binding domain-containing protein 5.	Pex14_N domain-containing protein.	0.711
Acbd5	Fis1	A0A2P8XAK1	A0A2P8YEY7	Acyl-CoA-binding domain-containing protein 5.	Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering.	0.712
Acbd5	Gdap1	A0A2P8XAK1	A0A2P8YEA1	Acyl-CoA-binding domain-containing protein 5.	Ganglioside-induced differentiation-associated protein 1; Belongs to the GST superfamily.	0.664
Acbd5	PEX14	A0A2P8XAK1	A0A2P8XUN7	Acyl-CoA-binding domain-containing protein 5.	Peroxisomal membrane protein PEX14.	0.711
Acbd5	Pex12	A0A2P8XAK1	A0A2P8Y1F9	Acyl-CoA-binding domain-containing protein 5.	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	0.684
Acbd5	SCP2	A0A2P8XAK1	A0A2P8Z699	Acyl-CoA-binding domain-containing protein 5.	Non-specific lipid-transfer protein.	0.697
Acbd5	atad1b	A0A2P8XAK1	A0A2P8YIF9	Acyl-CoA-binding domain-containing protein 5.	ATPase family AAA domain-containing protein 1-B; Belongs to the AAA ATPase family.	0.681
Acbd5	pex16	A0A2P8XAK1	A0A2P8ZPQ0	Acyl-CoA-binding domain-containing protein 5.	Peroxisomal membrane protein PEX16.	0.719