STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C0J52_27475zf-RING_UBOX domain-containing protein. (242 aa)    
Predicted Functional Partners:
C0J52_03803
ATG_C domain-containing protein.
    
 0.991
C0J52_10975
Protein kinase domain-containing protein.
    
 
 0.975
Atg5
Autophagy protein 5; Involved in autophagic vesicle formation.
    
 0.974
atg16
Autophagy-related protein 16.
   
 0.967
ATG16L1
Autophagy-related protein 16-1.
   
 0.967
C0J52_11621
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.
    
 0.964
Gabarap
Gamma-aminobutyric acid receptor-associated protein.
   
 0.905
ulk3
Serine/threonine-protein kinase ULK3; Belongs to the protein kinase superfamily.
    
 
 0.898
Atg3
Ubiquitin-like-conjugating enzyme ATG3.
    
 0.890
becn1
Beclin-1.
    
 0.889
Your Current Organism:
Blattella germanica
NCBI taxonomy Id: 6973
Other names: B. germanica, German cockroach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.