STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lman2lVIP36-like protein. (181 aa)    
Predicted Functional Partners:
Sec23a
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.847
C0J52_00012
Transmembrane emp24 domain-containing protein.
   
 0.783
bai
Transmembrane emp24 domain-containing protein bai.
   
 0.778
Lman1
Protein ERGIC-53.
    
0.753
C0J52_00838
Uncharacterized protein.
    
 0.742
Bet1
BET1 protein.
   
 
 0.735
sec22bb
Vesicle-trafficking protein SEC22b-B; Belongs to the synaptobrevin family.
    
 0.727
Gosr2
Golgi SNAP receptor complex member 2; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
   
 
 0.716
C0J52_07993
Uncharacterized protein.
     
 0.711
Sec13
Protein SEC13; Belongs to the WD repeat SEC13 family.
   
 0.709
Your Current Organism:
Blattella germanica
NCBI taxonomy Id: 6973
Other names: B. germanica, German cockroach
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