STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C0J52_19650WD_REPEATS_REGION domain-containing protein. (1038 aa)    
Predicted Functional Partners:
ttc37
Tetratricopeptide repeat protein 37.
    
 0.915
SKI2
DExH-box ATP-dependent RNA helicase DExH11.
    
 0.906
C0J52_19652
WD_REPEATS_REGION domain-containing protein.
 
      0.852
Atu
Another transcription unit protein.
    
 0.829
PAF1
RNA polymerase II-associated factor 1.
   
 0.828
C0J52_04026
CDC73_N domain-containing protein.
    
 0.800
CDC73
Parafibromin.
    
 0.800
ctr9
RNA polymerase-associated protein CTR9.
    
 0.746
CINP
Cyclin-dependent kinase 2-interacting protein.
    
 0.746
C0J52_03484
CPSF_A domain-containing protein.
    
 0.743
Your Current Organism:
Blattella germanica
NCBI taxonomy Id: 6973
Other names: B. germanica, German cockroach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.