STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C0J52_18751Uncharacterized protein. (456 aa)    
Predicted Functional Partners:
Iws1
Protein IWS1.
   
 0.993
supt4h1
Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.
    
 0.978
Polr2c
DNA-directed RNA polymerase II subunit RPB3.
    
 0.976
POLR2E
DNA-directed RNA polymerases I.
    
 0.971
RpII140
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.970
dre4
FACT complex subunit spt16.
   
 0.969
C0J52_20275
Uncharacterized protein.
   
 0.969
Atu
Another transcription unit protein.
   
 0.961
C0J52_15640
Plus3 domain-containing protein.
   
 
 0.960
RpII15
DNA-directed RNA polymerase II subunit RPB9.
    
 0.959
Your Current Organism:
Blattella germanica
NCBI taxonomy Id: 6973
Other names: B. germanica, German cockroach
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