STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
smyd5SET and MYND domain-containing protein 5. (412 aa)    
Predicted Functional Partners:
C0J52_17830
P53 domain-containing protein.
    
  0.675
C0J52_02696
P53 domain-containing protein.
    
  0.675
C0J52_03079
Uncharacterized protein.
 
 
    0.667
C0J52_03017
Uncharacterized protein.
    
 0.656
eca
Transmembrane emp24 domain-containing protein eca.
 
   
 0.653
PRDM4
PR domain zinc finger protein 4.
   
 0.649
C0J52_02156
Uncharacterized protein.
   
 0.629
C0J52_05071
KRAB domain-containing protein.
   
 0.616
Dox-A2
Putative 26S proteasome non-ATPase regulatory subunit 3.
    
 0.612
ash2
Set1/Ash2 histone methyltransferase complex subunit ASH2.
    
 0.611
Your Current Organism:
Blattella germanica
NCBI taxonomy Id: 6973
Other names: B. germanica, German cockroach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.