STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdcd6ipProgrammed cell death 6-interacting protein. (713 aa)    
Predicted Functional Partners:
chmp4b
Charged multivesicular body protein 4b.
    
 0.997
C0J52_19521
Uncharacterized protein.
    
 0.994
Mdp1_2
Magnesium-dependent phosphatase 1.
    
 0.980
Mdp1_1
Magnesium-dependent phosphatase 1.
    
 0.980
TSG101
Tumor susceptibility protein 101.
   
 0.978
C0J52_17606
MABP domain-containing protein.
     
 0.926
Vps4a
Vacuolar protein sorting-associated protein 4A; Belongs to the AAA ATPase family.
   
 0.922
C0J52_01955
AAA domain-containing protein.
   
 0.922
Pdcd6
Programmed cell death protein 6.
    
 
 0.921
SDCBP
Syntenin-1.
    
 0.917
Your Current Organism:
Blattella germanica
NCBI taxonomy Id: 6973
Other names: B. germanica, German cockroach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.