STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C0J52_05932F-box domain-containing protein. (345 aa)    
Predicted Functional Partners:
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.990
Cul1
Cullin-1; Belongs to the cullin family.
   
 0.986
PI31
Proteasome inhibitor PI31 subunit.
   
 0.980
cul3
Cullin-3; Belongs to the cullin family.
   
 0.946
Roc1a
RING-box protein 1A.
    
 0.909
C0J52_16891
Ribosomal_L2 domain-containing protein.
    
 0.881
PSMB4
Proteasome subunit beta; Belongs to the peptidase T1B family.
    
 0.851
C0J52_13365
Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family.
    
 0.838
C0J52_12970
Uncharacterized protein.
    
 0.822
C0J52_07178
Uncharacterized protein.
    
 0.821
Your Current Organism:
Blattella germanica
NCBI taxonomy Id: 6973
Other names: B. germanica, German cockroach
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