STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C0J52_07263Uncharacterized protein. (102 aa)    
Predicted Functional Partners:
C0J52_16764
Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.
   
 0.838
C0J52_02902
Uncharacterized protein.
    
 0.833
C0J52_23172
Uncharacterized protein.
    
 0.810
C0J52_14674
Uncharacterized protein.
    
 0.810
Smc1a
Structural maintenance of chromosomes protein 1A.
   
 0.623
Smc3
Structural maintenance of chromosomes protein 3.
    
 0.602
smc3
Structural maintenance of chromosomes protein 3.
    
 0.602
C0J52_06239
Uncharacterized protein.
    
 0.602
smc2
Structural maintenance of chromosomes protein 2.
    
 0.594
C0J52_12096
SMC hinge domain-containing protein.
    
 0.594
Your Current Organism:
Blattella germanica
NCBI taxonomy Id: 6973
Other names: B. germanica, German cockroach
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