STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU23652.1PFAM: Dockerin type 1; KEGG: tva:TVAG_154640 surface antigen BspA-like. (444 aa)    
Predicted Functional Partners:
ADU22699.1
KEGG: tva:TVAG_493740 hypothetical protein.
  
     0.718
ADU22252.1
Hypothetical protein; KEGG: shi:Shel_11960 putative cell wall binding protein.
  
     0.647
ADU20712.1
Lipoprotein; KEGG: efa:EF2248 hypothetical protein; TIGRFAM: lipoprotein; PFAM: protein of unknown function DUF285 lipoprotein; Fibronectin type III domain protein.
  
     0.514
ADU21435.1
PFAM: Fibronectin type III domain protein; KEGG: fsu:Fisuc_2145 GLUG domain protein.
  
     0.512
ADU23178.1
Lipoprotein; KEGG: efa:EF2248 hypothetical protein; TIGRFAM: lipoprotein; PFAM: protein of unknown function DUF285 lipoprotein.
  
     0.508
ADU23653.1
PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: pmo:Pmob_0901 pyridoxamine kinase; Belongs to the pyridoxine kinase family.
       0.470
ADU23654.1
tRNA/rRNA methyltransferase (SpoU); Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.
       0.470
ADU20887.1
Lipoprotein; KEGG: efa:EF2248 hypothetical protein; TIGRFAM: lipoprotein; PFAM: protein of unknown function DUF285 lipoprotein.
  
     0.406
ADU23655.1
Hypothetical protein; KEGG: pfa:PF07_0042 conserved Plasmodium protein, unknown function.
       0.405
Your Current Organism:
Ruminococcus albus 7 DSM 20455
NCBI taxonomy Id: 697329
Other names: R. albus 7 = DSM 20455, Ruminococcus albus 7, Ruminococcus albus 7 = DSM 20455, Ruminococcus albus DSM 20455, Ruminococcus albus DSM 20455 = 7
Server load: high (82%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.