STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G7K_4260-t1B30.2/SPRY domain-containing protein. (894 aa)    
Predicted Functional Partners:
G7K_0959-t1
CTLH domain-containing protein.
   
 
 0.846
G7K_4613-t1
Uncharacterized protein.
   
 
 0.808
G7K_3017-t1
Uncharacterized protein.
    
 
 0.757
G7K_3490-t1
Uncharacterized protein.
    
 
 0.757
G7K_1535-t1
SAP30_Sin3_bdg domain-containing protein.
   
 
 0.737
G7K_3384-t1
Uncharacterized protein.
   
 
 0.737
G7K_3384-t2
Uncharacterized protein.
   
 
 0.737
G7K_2586-t1
Protein yippee-like; Belongs to the yippee family.
   
 
 0.698
HCR1
Eukaryotic translation initiation factor 3 subunit J; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
    
   0.558
G7K_2958-t1
Uncharacterized protein.
    
   0.558
Your Current Organism:
Saitoella complicata
NCBI taxonomy Id: 698492
Other names: S. complicata NRRL Y-17804, Saitoella complicata CBS 7301, Saitoella complicata CCRC 22490, Saitoella complicata IAM 12963, Saitoella complicata JCM 7358, Saitoella complicata NBRC 10748, Saitoella complicata NRRL Y-17804
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.