STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCK77066.1Lipoprotein. (279 aa)    
Predicted Functional Partners:
CCK77067.1
Conserved hypothetical protein.
 
     0.927
CCK77068.1
Conserved hypothetical protein.
 
     0.846
CCK75109.1
Carboxylesterase.
     
 0.799
CCK76144.1
Glycosyl transferase, group 1.
   
 
 0.760
CCK76126.1
Hypothetical protein.
   
 
 0.738
CCK76154.1
Glycosyltransferase, RfaG.
   
 
 0.738
CCK76156.1
Putative glycosyl transferase, group 1.
   
 
 0.738
CCK76157.1
Weak similarity to lycosyl transferase, group 1 superfamily.
   
 
 0.738
CCK76158.1
Glycosyl transferase, group 1. By similarity.
   
 
 0.738
CCK77021.1
Putative glycosyltransferase group 1. By similarity.
   
 
 0.738
Your Current Organism:
Oleispira antarctica
NCBI taxonomy Id: 698738
Other names: O. antarctica RB-8, Oleispira antarctica DSM 14852, Oleispira antarctica RB-8, Oleispira antarctica str. RB-8, Oleispira antarctica strain RB-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.