STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB89335.1Protein of unknown function; InterPro IPR011098:IPR007137:IPR010611; COGs: COG3583 conserved hypothetical protein; KEGG: mta:Moth_0050 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: 3D domain-containing protein; G5 domain protein; protein of unknown function DUF348. (317 aa)    
Predicted Functional Partners:
SMB97936.1
LysM domain-containing protein; InterPro IPR018392:IPR002482; KEGG: dae:Dtox_4246 peptidoglycan-binding LysM; SPTR: Peptidoglycan-binding LysM; SMART: Peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; manually curated.
  
  
 0.900
rsmA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
  
  
 0.790
SMB93924.1
Tetratricopeptide repeat-containing protein; InterProIPR001296:IPR001440:IPR013216:IPR019734:IPR 013026; COGs: COG0438 Glycosyltransferase; KEGG: pcu:pc1183 putative mannosyltransferase; SPTR: Putative uncharacterized protein; SMART: Tetratricopeptide repeat; PFAM: glycosyl transferase group 1; Tetratricopeptide TPR_1 repeat-containing protein; Methyltransferase type 11.
  
  
 0.681
SMB89330.1
TatD DNase family protein; InterProIPR015991:IPR012278:IPR002195:IPR018228:IPR 001130; COGs: COG0084 Mg-dependent DNase; KEGG: mta:Moth_0049 TatD-related deoxyribonuclease; SPTR: TatD-related deoxyribonuclease; PFAM: TatD-related deoxyribonuclease; TIGRFAM: hydrolase, TatD family.
     
 0.666
SMB90811.1
Uncharacterized conserved protein YlxW, UPF0749 family; InterPro IPR010273; COGs: COG3879 conserved hypothetical protein; KEGG: mta:Moth_2249 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: protein of unknown function DUF881.
 
     0.631
SMB89341.1
Protein of unknown function; InterPro IPR011098:IPR007137:IPR010611; COGs: COG3583 conserved hypothetical protein; KEGG: mta:Moth_0051 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: G5 domain protein; protein of unknown function DUF348; 3D domain-containing protein.
 
    
0.609
ispE
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.
     
 0.604
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
       0.589
SMB92575.1
N-acetylmuramoyl-L-alanine amidase; InterPro IPR003646:IPR002508:IPR012854:IPR013247; COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; KEGG: mta:Moth_0517 N-acetylmuramoyl-L-alanine amidase; SPTR: N-acetylmuramoyl-L-alanine amidase; SMART: cell wall hydrolase/autolysin; SH3 domain protein; PFAM: cell wall hydrolase/autolysin; copper amine oxidase-like domain-containing protein; SH3 type 3 domain protein; PRIAM: N-acetylmuramoyl-L-alanine amidase.
  
 
 0.588
SMB90804.1
Uncharacterized conserved protein YlxW, UPF0749 family; InterPro IPR010273; COGs: COG3879 conserved hypothetical protein; KEGG: mta:Moth_2250 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: protein of unknown function DUF881.
 
     0.582
Your Current Organism:
Thermanaeromonas toyohensis
NCBI taxonomy Id: 698762
Other names: T. toyohensis ToBE, Thermanaeromonas toyohensis DSM 14490, Thermanaeromonas toyohensis ToBE, Thermanaeromonas toyohensis str. ToBE, Thermanaeromonas toyohensis strain ToBE, Thermoanaerobacter sp. ToBE
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.