STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB97856.1Serine/threonine-protein kinase RsbT; InterPro IPR003594; COGs: COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase); KEGG: adg:Adeg_1812 putative anti-sigma regulatory factor, serine/threonine protein kinase; SPTR: Putative anti-sigma regulatory factor, serine/threonine protein kinase; SMART: ATP-binding region ATPase domain protein; PFAM: ATP-binding region ATPase domain protein. (153 aa)    
Predicted Functional Partners:
SMB97859.1
rsbT antagonist protein RsbS; InterPro IPR002645; KEGG: adg:Adeg_1811 anti-sigma-factor antagonist; SPTR: Anti-sigma-factor antagonist; PFAM: Sulfate transporter/antisigma-factor antagonist STAS.
 
 0.998
SMB97861.1
rsbT co-antagonist protein RsbR; InterPro IPR002645; COGs: COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); KEGG: adg:Adeg_1810 anti-sigma-factor antagonist; SPTR: Anti-sigma-factor antagonist; PFAM: Sulfate transporter/antisigma-factor antagonist STAS.
 
 0.998
SMB97853.1
Stage II sporulation protein E (SpoIIE); KEGG: adg:Adeg_1813 protein serine/threonine phosphatase; SPTR: Protein serine/threonine phosphatase; SMART: protein phosphatase 2C domain protein; InterPro IPR010822:IPR001932; PFAM: Stage II sporulation protein E.
 
 0.994
SMB97851.1
Diguanylate cyclase (GGDEF) domain-containing protein; InterPro IPR000160:IPR001633; COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; KEGG: dau:Daud_0698 diguanylate cyclase/phosphodiesterase; SPTR: Diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein; PFAM: EAL domain protein; GGDEF domain containing protein; TIGRFAM: diguanylate cyclase.
  
 
 0.941
SMB97852.1
Diguanylate cyclase (GGDEF) domain-containing protein; InterPro IPR000160; COGs: COG2199 FOG: GGDEF domain; KEGG: adg:Adeg_1814 diguanylate cyclase; SPTR: Diguanylate cyclase; SMART: GGDEF domain containing protein; PFAM: GGDEF domain containing protein; TIGRFAM: diguanylate cyclase.
  
 
 0.869
SMB98537.1
InterPro IPR003658:IPR014237:IPR002645; COGs: COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); KEGG: mta:Moth_1498 anti-sigma-factor antagonist domain-containing protein; SPTR: Anti-sigma factor antagonist; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; TIGRFAM: anti-sigma F factor antagonist; anti-anti-sigma factor.
  
 
 0.856
SMB98535.1
RNA polymerase, sigma subunit, RpoX/SigF; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
 
 0.814
flgK
InterPro IPR002371:IPR001444:IPR010930; COGs: COG1256 Flagellar hook-associated protein; KEGG: mta:Moth_0746 flagellar hook-associated protein FlgK; SPTR: Flagellar hook-associated protein; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein.
   
    0.794
SMB93961.1
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
   
    0.794
SMB93984.1
InterPro IPR000090:IPR006668; COGs: COG1536 Flagellar motor switch protein; KEGG: mta:Moth_0772 flagellar motor switch protein G; SPTR: Flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG; MgtE intracellular region; TIGRFAM: flagellar motor switch protein FliG.
   
    0.794
Your Current Organism:
Thermanaeromonas toyohensis
NCBI taxonomy Id: 698762
Other names: T. toyohensis ToBE, Thermanaeromonas toyohensis DSM 14490, Thermanaeromonas toyohensis ToBE, Thermanaeromonas toyohensis str. ToBE, Thermanaeromonas toyohensis strain ToBE, Thermoanaerobacter sp. ToBE
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