STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB98744.1Pyrimidine-nucleoside phosphorylase; InterProIPR017872:IPR018090:IPR000053:IPR017459:IPR 000312:IPR013102; COGs: COG0213 Thymidine phosphorylase; KEGG: pyrimidine-nucleoside phosphorylase; SPTR: Pyrimidine-nucleoside phosphorylase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like; Pyrimidine nucleoside phosphorylase domain; TIGRFAM: pyrimidine-nucleoside phosphorylase. (434 aa)    
Predicted Functional Partners:
SMB92996.1
Cytidine deaminase; InterPro IPR002125:IPR016192; COGs: COG0295 Cytidine deaminase; KEGG: mta:Moth_0599 cytidine deaminase; SPTR: Cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; manually curated.
 
 0.997
deoB
Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.
 
 
 0.995
deoB-2
Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.
 
 
 0.979
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
 
 
 0.970
surE
5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
 
  
 0.905
SMB98757.1
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase; InterProIPR001119:IPR006146:IPR004843:IPR008334:IPR 006179; COGs: COG0737 5'-nucleotidase/2' 3'-cyclic phosphodiesterase and related esterase; KEGG: cpo:COPRO5265_0800 multifunctional protein: 5-nucleotidase 2,3-cyclic-nucleotide 2-phosphodiesterase; SPTR: Multifunctional protein: 5-nucleotidase 2,3-cyclic-nucleotide 2-phosphodiesterase; PFAM: 5'-Nucleotidase domain-containing protein; metallophosphoesterase; S-layer domain-containing protein.
 
  
 0.888
SMB91999.1
Dihydroorotate dehydrogenase (fumarate); InterProIPR017900:IPR001295:IPR012135:IPR017896:IPR 005720; COGs: COG0167 Dihydroorotate dehydrogenase; KEGG: cdl:CDR20291_1984 dihydroorotate dehydrogenase, catalytic subunit; SPTR: Dihydroorotate dehydrogenase, catalytic subunit; PFAM: dihydroorotate oxidase; TIGRFAM: dihydroorotate dehydrogenase family protein.
    
 0.887
SMB99737.1
Putative selenate reductase; InterProIPR017900:IPR013027:IPR017701:IPR017896:IPR 000759; COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; KEGG: mta:Moth_1949 putative selenate reductase subunit YgfK; SPTR: FAD dependent oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: selenate reductase YgfK.
    
 0.885
SMB99682.1
KEGG: sth:STH347 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
 0.882
pyrR
Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily.
     
 0.880
Your Current Organism:
Thermanaeromonas toyohensis
NCBI taxonomy Id: 698762
Other names: T. toyohensis ToBE, Thermanaeromonas toyohensis DSM 14490, Thermanaeromonas toyohensis ToBE, Thermanaeromonas toyohensis str. ToBE, Thermanaeromonas toyohensis strain ToBE, Thermoanaerobacter sp. ToBE
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