STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000934755_03375Unannotated protein. (78 aa)    
Predicted Functional Partners:
GCA_000934755_03374
Unannotated protein.
 
     0.932
GCA_000934755_03376
Unannotated protein.
       0.773
GCA_000934755_00466
Unannotated protein.
 
  
 0.712
GCA_000934755_01493
Unannotated protein.
  
 
 0.685
GCA_000934755_00471
Unannotated protein.
 
  
 0.633
GCA_000934755_02989
Unannotated protein.
  
 
 0.625
GCA_000934755_00467
Unannotated protein.
 
  
 0.597
GCA_000934755_02880
Unannotated protein.
    
 0.593
GCA_000934755_03377
Unannotated protein.
    
 0.590
GCA_000934755_01495
Unannotated protein.
    
 0.579
Your Current Organism:
Desulfonatronovibrio magnus
NCBI taxonomy Id: 698827
Other names: D. magnus, DSM 24400, Desulfonatronovibrio magnus Sorokin et al. 2011, Desulfonatronovibrio sp. AHT22, UNIQEM U844, strain AHT22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.