STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV98951.1gpW/GP25 family protein; PFAM: Gene 25-like lysozyme; KEGG: cpi:Cpin_2306 gpW/GP25 family protein; SPTR: GPW/gp25 family protein. (144 aa)    
Predicted Functional Partners:
AEV96867.1
Rhs element Vgr protein; PFAM: Phage-related baseplate assembly protein; TIGRFAM: Rhs element Vgr protein; COGs: COG3500 Phage protein D; InterPro IPR006533; KEGG: fjo:Fjoh_3155 rhs element Vgr protein; PFAM: Rhs element Vgr protein; SPTR: Rhs element Vgr protein; TIGRFAM: Rhs element Vgr protein.
 
 
 0.974
AEV96861.1
KEGG: ana:all3326 hypothetical protein; SPTR: All3326 protein.
  
 
 0.963
AEV96862.1
PFAM: Phage tail sheath protein; COGs: COG3497 Phage tail sheath protein FI; InterPro IPR007067; KEGG: dar:Daro_3614 putative phage tail sheath protein FI; SPTR: Putative phage tail sheath protein FI.
  
 
 0.963
AEV96870.1
PFAM: Baseplate J-like protein; KEGG: dfe:Dfer_0667 hypothetical protein; SPTR: Putative uncharacterized protein.
 
 
 0.931
AEV98950.1
KEGG: cpi:Cpin_2305 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
 
     0.912
AEV96866.1
KEGG: dfe:Dfer_0670 hypothetical protein; SPTR: Putative uncharacterized protein.
  
   0.907
AEV96871.1
KEGG: dfe:Dfer_0666 hypothetical protein; SPTR: Putative uncharacterized protein.
 
 
   0.890
AEV98949.1
KEGG: cpi:Cpin_2308 hypothetical protein; SPTR: Putative uncharacterized protein.
 
   
 0.879
AEV96865.1
KEGG: dfe:Dfer_0671 hypothetical protein; SPTR: Putative uncharacterized protein.
   
   0.859
AEV98947.1
KEGG: cpi:Cpin_2310 hypothetical protein; SPTR: Putative uncharacterized protein.
 
   
 0.857
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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