STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO46885.1PFAM: oxidoreductase domain protein; KEGG: cro:ROD_48011 putative oxidoreductase. (325 aa)    
Predicted Functional Partners:
ADO46886.1
PFAM: protein of unknown function DUF45; KEGG: enc:ECL_04487 hypothetical protein.
 
     0.672
ADO47524.1
PFAM: thiamine pyrophosphate central domain-containing protein; thiamine pyrophosphate TPP-binding domain-containing protein; KEGG: eic:NT01EI_2136 putative malonic semialdehyde oxidative decarboxylase; Belongs to the TPP enzyme family.
  
  
 0.546
ADO47532.1
KEGG: enc:ECL_03800 5-deoxy-glucuronate isomerase.
  
  
 0.545
rlmG
rRNA (guanine-N(2)-)-methyltransferase; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA.
 
     0.524
ADO47922.1
TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: vvy:VV0341 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.493
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
 
 0.464
ADO46884.1
PFAM: Integral membrane protein TerC; KEGG: efe:EFER_4389 conserved hypothetical protein; putative inner membrane protein, part of terminus.
       0.434
ADO47752.1
PFAM: oxidoreductase domain protein; KEGG: seh:SeHA_C2927 putative dehydrogenase.
  
     0.419
ADO47531.1
Myo-inosose-2 dehydratase; KEGG: cko:CKO_03985 hypothetical protein; PFAM: Xylose isomerase domain-containing protein TIM barrel.
  
  
 0.408
arnB
DegT/DnrJ/EryC1/StrS aminotransferase; Catalyzes the conversion of UDP-4-keto-arabinose (UDP-Ara4O) to UDP-4-amino-4-deoxy-L-arabinose (UDP-L-Ara4N). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides; Belongs to the DegT/DnrJ/EryC1 family. ArnB subfamily.
  
  
 0.403
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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