STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO48124.1PFAM: protein of unknown function UCP030771; KEGG: enc:ECL_01703 hypothetical protein. (107 aa)    
Predicted Functional Partners:
ADO48125.1
KEGG: ect:ECIAI39_4884 conserved hypothetical protein from putative prophage.
  
    0.969
ADO48120.1
PFAM: terminase GpA; KEGG: enc:ECL_01686 phage terminase large subunit.
 
    0.938
ADO48128.1
KEGG: enc:ECL_01707 GP13; PFAM: Ig domain protein group 2 domain protein; SMART: Ig domain protein group 2 domain protein.
 
    0.930
ADO48122.1
KEGG: enc:ECL_01688 phage portal protein, lambda family; TIGRFAM: phage portal protein, lambda family; PFAM: portal protein lambda.
 
    0.928
ADO48123.1
PFAM: peptidase S14 ClpP; KEGG: ecf:ECH74115_3134 putative phage portal protein, lambda family; Belongs to the peptidase S14 family.
 
    0.915
ADO48126.1
PFAM: Prophage minor tail Z family protein; KEGG: enc:ECL_01705 GP11.
  
    0.840
ADO48127.1
PFAM: minor tail U; KEGG: enc:ECL_01706 minor tail protein U.
  
    0.830
ADO48131.1
KEGG: enc:ECL_01710 GP16; TIGRFAM: phage tail tape measure protein, lambda family; PFAM: Prophage tail length tape measure.
 
    0.818
ADO48129.1
KEGG: enc:ECL_01708 GP14; TIGRFAM: phage minor tail protein G; PFAM: minor tail protein G.
  
    0.703
ADO47996.1
PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: cro:ROD_21441 propanediol utilization protein PduX.
  
     0.683
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.